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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911009.1_cds_XP_016461059.1_54418
CDS Infomation

[gene=LOC107784441] [db_xref=GeneID:107784441] [protein=probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2] [protein_id=XP_016461059.1] [location=complement(join(24188..24787,25432..26301))] [gbkey=CDS]
Sequence

ATGGAGTATGCTCTAACAGTTTCCTTCCTTATCTTGATTCCATTTTTTGTACTCATCCTC
AAACAAATCATACCAAAATCAGGAAATCTTCCACCAGGACCTCGACCATGGCCAATACTA
GGAAATATTCTCCAGTTGGGAAAAAACCCTCATATTTCCATGACACAATTTGCCAAAATT
CACGGCCCATTAATCTCTCTCAGGCTGGGAACTCAACTAGTTGTCATAGCTTCATCCCCT
GATTCCGCAGCTGAAATACTCAAGACTCAAGATCGTTTGCTCTCAGCTCGGTCCGTGCCC
AGAGTTGCTCCATATAAACTCTCTGTTGTTGATCAACACTCACTTGTCTGGTCCAGTGAT
TTGAGCAATCACTGGAAATCCTTAAGGGCATTCTGTCGAACACATTTGTTCTCAGCCAAA
GCAGTTGAGTCACAAGCTGCTTTGAGGGAGAAAAAAGTGTTTGAAATGATAGAATTTCTT
AGGTCCAAGAAAGGGAAAACCGTAAAGATTTCTGAAATTATGTTTGCTACCATTTTGAAT
ACGTTAGGGAATCTTTTCTTTACAAAAGATTTGTGTGATTTGGATTATGAAGGGAACACT
AGTGGGATCAAACATGTTATAAGGAAATTTGTAGAATTGGGAGCTATGCCAAATATATCA
GAATTTTATCCTTTTTTGGATGCTCTTGATTTGCAGGGTTTGAGAAAGCAGACTAAGATA
TATCAGGGTCAATTGTTTAACATCTGGGCTGAAATTGTCAAGGAAAAAAGGCAGGCAATT
AGTCGTGGGAGCTCCAATAAAATTCAAGATTTTTTGGATATCATGATTTATAGTGGATTC
ACGGATTTACAGATCAATATCATATTAATGGAATTAATTGCTGCGGGTACAGACACTACT
ACCTCAACAATTGAATGGGCAACGGCGGAACTGCTAAGGAACAAGGAAGTTATGCACAAA
CTTCAAGCTGAGCTCAGAAGTAAGATAGGGAGCAATGCCATTATAAGAGAATCCAATATC
AGTGAACTTCCATATTTAGCTGCTTGTGTCAAGGAGACATTGAGAATCCATCCGCCAACT
CCATTCTTGATTCCTCGTCGTGCTCCTGAGACGTGTAAGCTTATGAATTACACCATCCCA
AAGAACTCGAGGTTGTTTGTGAACGTTTGGGCAATAGGGTGCGATTCTAAAACTTGGGAA
GATGCGTTATCTTTCAGACCCGAGCGATTTATCGACTCTAGTGTAGATTTTAGGGGTCAA
GATTTTGAGTTTATACCATTTGGTGCTGGGAGGAGAATATGCCCTGGCTTACCTTTTGCT
AGACAAGAAGTACACTTGATTTTAGCTAGTTTGATCCATCACTTTGAGTGGTCACTTCCG
TATGGTGAGGATCCAATGTTGTTAGATATGGAAGAAAAGTTTGGGGTTACTCTTCAGAAA
GAAAAACCTCTACTAGTTGTCCCTAGATAA

Peptide Sequence

PEP ID

XP_016461059.1
PEP Infomation

PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 [Nicotiana tabacum]
Sequence

MEYALTVSFLILIPFFVLILKQIIPKSGNLPPGPRPWPILGNILQLGKNPHISMTQFAKI
HGPLISLRLGTQLVVIASSPDSAAEILKTQDRLLSARSVPRVAPYKLSVVDQHSLVWSSD
LSNHWKSLRAFCRTHLFSAKAVESQAALREKKVFEMIEFLRSKKGKTVKISEIMFATILN
TLGNLFFTKDLCDLDYEGNTSGIKHVIRKFVELGAMPNISEFYPFLDALDLQGLRKQTKI
YQGQLFNIWAEIVKEKRQAISRGSSNKIQDFLDIMIYSGFTDLQINIILMELIAAGTDTT
TSTIEWATAELLRNKEVMHKLQAELRSKIGSNAIIRESNISELPYLAACVKETLRIHPPT
PFLIPRRAPETCKLMNYTIPKNSRLFVNVWAIGCDSKTWEDALSFRPERFIDSSVDFRGQ
DFEFIPFGAGRRICPGLPFARQEVHLILASLIHHFEWSLPYGEDPMLLDMEEKFGVTLQK
EKPLLVVPR

Transcript Sequence

Gene sequence data has not been registered.